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Table 2 Five most abundant phyla, genera and species among 20 individuals with Cartilage-hair hypoplasia (CHH) and 41 healthy controls. The table shows the number of the taxa present in cases, controls and all samples, as well as their median strain counts. Median count signifies median taxon count

From: Altered oral microbiome, but normal human papilloma virus prevalence in cartilage-hair hypoplasia patients

  

Individuals with CHH

Controls

All

 

Taxon

n

n %

Median count

n

n %

Median count

n

n %

Median count

Phylum

Firmicutes

20

100

78,828

41

100

194,809

61

100

169,190

Proteobacteria

20

100

32,777

41

100

106,890

61

100

77,414

Actinobacteriota

20

100

47,677

41

100

65,260

61

100

59,906

Bacteroidota

20

100

9971

41

100

17,215

61

100

16,267

Firmicutes_C

20

100

7309

41

100

43,385

61

100

24,056

Genus

Streptococcus

20

100

65833.5

41

100

160,991

61

100

158,785

F0040

20

100

634

37

90.2

2007

57

93.4

1135

Actinomyces

20

100

5864

41

100

23,664

61

100

16,802

Haemophilus_D

19

95

3185.5

41

100

8611

60

98.4

6366

Haemophilus

19

95

2315

41

100

7559

60

98.4

4828

Species

Streptococcus pneumoniae

20

100

48452.5

41

100

117,580

61

100

105,648

Actinomyces viscosus

20

100

5101

41

100

22,918

61

100

15,391

F0040 sp900095835

15

75

77

31

75.6

1655

38

62.3

633

Streptococcus gwangjuense

20

100

14774.5

41

100

40,680

61

100

32,877

Haemophilus_D parainfluenzae_A

19

95

3038

41

100

8268

60

98.4

5944