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Table 1 Role of miRNAs in FMF pathogenesis: expression profile and reported mechanisms of action

From: Updates on the role of epigenetics in familial mediterranean fever (FMF)

miRNAs differentially expressed in FMF patients as compared to controls

Mechanism of actions

Reported role in immunity

Validated role in FMF

Validation experimental approach in FMF

References

↑: miR-144-3p, miR-21-5p, miR-4454, and miR-451a

↓: miR-107, let-7d-5p, and miR-148b-3p

Inflammation

Let-7d-5p represses the proliferation of Th1 cells and IFN- γ release [79]

N/A

N/A

Amarilyo et al. (2018) [93]

miR-107 acts on CDK6. Upon LPS stimulation, miR-107 is downregulated which promotes the expression of CDK6 and adhesion of macrophages [115]

N/A

N/A

miR-148b-3p suppresses the production of IL-12, IL-6, and TNF-α [95]

N/A

N/A

↑: miR-34a-5p, miR-142-3p, miR-216a-5p, miR-340-5p, miR-429, and miR-582-5p

↓: miR-107, miR-569, and miR-1304-5p

Inflammation

miR-34a-5p activates nuclear factor erythroid-2 related factor 2/heme oxygenase-1 (Nrf2/HO-1) pathway and reduces inflammation [116]

N/A

N/A

Kahraman et al. (2021) [97]

↓ miR-204-3p

Inflammation

IGFBP2/AKT/Bcl2 pathway is regulated by miR-204-3p which suppresses the growth of hepatocellular carcinoma tumor endothelial cells [117]

miR-204-3p inhibits the PI3Kγ pathway which usually promotes the release of inflammatory cytokines including IL-12p40 and IL-6

`

-Transfection of macrophages generated from THP-1 cells with pre-miRNA followed by LPS stimulation

-Quantification of inflammatory cytokine production using multiplex cytokine assay

-Targeted genes were identified by overexpressing the miRNA and conducting a cDNA microarray

-miR-204-3p suppression of PI3K-γ was confirmed by luciferase activity assay

Koga et al. (2017) [98]

↑: miR-20a-5p (in homozygous patients) and let-7d-3p and miR-574-3p (in heterozygous patients)

↓: miR-197-3p (in homozygous patients)

Inflammation

The 4 miRNAs, miR-20a-5p, let-7d-3p, miR-574-3p, and miR-197-3p, were shown to be involved in TGF-β, TLR, and NLR signaling pathways, apoptosis, and actin cytoskeleton regulation [91]

miR-197-3p was proved to repress the expression of IL1-R1 resulting in the decrease of IL-1β expression and production in FMF patients

miR-197-3p anti-inflammatory role was validated by:

- pre-miR-197 transfection

-Inflammation related functional assays, apoptosis assay, cell migration assay

-Confirmation via anti-miR-197 transfection

-Targeting genes studied via 3’UTR luciferase activity assay

Akkaya-Ulum et al. (2017,2021)

[91, 101]

In rheumatoid arthritis, miR-20a was reported to have an anti-inflammatory role by regulating the expression of apoptosis signal-regulating kinase (ASK) 1 which is involved in TLR4 pathway particularly upstream of p38 mitogen-activated protein kinase. Additionally, mir-20 a was found to target signal-regulatory protein α (SIRPα) involved in the regulation of leukocyte inflammatory responses [118, 119]

In hepatitis B virus infection, miR-197 was shown to promote liver inflammation by acting on IL-18 [120]

In hepatocellular carcinoma, miR-107 was shown to target the IL-6/STAT3 inflammatory signaling pathway [121]

↓: miR-181a and miR-125a

Inflammation

miR-181a is involved in the differentiation and activation of T cells [110]

N/A

N/A

AbdelKawy et al. (2021) [109]

miR-125a decreases the production of IL-10 receptor α, IL-2 receptor β, and IFN-γ [109]

↓: miR-125a, miR-132, miR-146a, miR-155, miR-15a, miR-16, miR-181a, miR-21, miR-223, miR-26a, and miR-34a

Inflammation

mir-155 plays an anti-inflammatory role by inhibiting molecules including matrix metalloproteinases, protein phosphatase 2A, TLR ligands, and IL-2 [103]

N/A

N/A

Hortu et al. (2019)

[102]

mir-223, mir-16, and mir-15a are shown to decrease inflammation by inhibiting the NF- κB pathway in a similar way to NF-κB kinase inhibitors [104]

miR-132 has an anti-inflammatory role by affecting the TLR4-NFκB-TNF-a/IL-1β signaling pathway [102]

Decrease in mir-125a expression in lupus T cells was associated with an increase in the activity of Kruppel-like factor 13 and an overproduction of the inflammatory chemokine RANTES [122]

↑: miR-4520a

Autophagy

N/A

miR-4520a targets RHEB which activates mTOR pathway

Using in silico and bioinformatic analysis, RHEB was found to be the target of miR-4520a

Latsoudis et al. (2017)

[100]

↑: miR-15a-5p, miR-29b-3p, miR-181a-5p, miR-181b-5p, miR-181c-5p, miR-214-3p, and miR-365a-3p

↓: let-7a-5p, let-7c, let-7 g-5p, miR-15b-5p, miR-16-5p, miR-17-5p, miR-23a-3p, miR-24-3p, miR-25-3p, miR-26a-5p, miR-26b-5p, miR-27a-3p, miR-29c-3p, miR-30a-5p, miR-30d-5p, miR-30e-5p, miR-106b-5p, miR-146a-5p, and miR-195-5p

Apoptosis

miR-181b-5p suppresses apoptosis by affecting MEK/ERK/p21 pathway [108]

N/A

N/A

Karpuzoglu et al. (2020)

[105]

Downregulation of miR-17-5p was shown to promote apoptosis by increasing the expression of phosphatase and tensin homolog while the decrease in miR-25 expression was shown to induce apoptosis by upregulating high mobility group box 1 [123, 124]

Upregulation of miR-16-5p and miR-195-5p were reported to activate caspases 3 and 9 [106, 107]

  1. ↑: Upregulation; ↓: Downregulation; ASK: Apoptosis signal-regulating kinase; CDK6: Cell division protein kinase 6; IFN-γ: Interferon gamma; IGFBP2/AKT/Bcl2: Insulin-like growth factor-binding protein-2/AKT/B-cell lymphoma 2 y; IL: Interleukin; IL1-R1: Interleukin-1-receptor-1; LPS: Lipopolysaccharide; MEK/ERK/p21: Mitogen-activated protein kinase/extracellular signal-regulated kinase/p21; mTOR: Mammalian target of rapamycin; N/A: Not applicable; NF-κB: Nuclear factor kappa-light-chain-enhancer of activated B cells; NLR: Nod-like receptor; Nrf2/HO-1: Nuclear factor erythroid-2 related factor 2 /heme oxygenase-1; PI3K-γ: Phosphoinositide 3-kinase gamma; RANTES: Regulated upon activation, normal T-cell expressed and secreted; RHEB: Ras homolog enriched in the brain; SIRPα: Signal-regulatory protein α; STAT3: Signal transducer and activator of transcription 3; TGF-β: Transforming growth factor beta; Th1: T helper 1; TLR: Toll-like receptor; TNFα: Tumor necrosis factor alpha