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Table 1 Genotype characteristics of terminal 6q and interstitial 6q26q27 deletions

From: The phenotypic spectrum of terminal 6q deletions based on a large cohort derived from social media and literature: a prominent role for DLL1

Subgroup

Cohort parent/literature

No. of foetuses

Age median* (range) years; months

Deletion size median (range) Mb

No. of OMIM genes median (range)

No. of HI genes median (range)

Total terminal (n = 93)

35/58

8

7;5 (0;0–57;0)

6.45 (0.39–16.00)

25 (3–62)

4 (1–14)

  Parent cohort

35/0

1

4;6 (0;6–32;9)

8.39 (0.76–16.00)

29 (5–62)

6 (2–14)

  Literature cohort

0/58

7

12;0 (0;0–57;0)

4.14 (0.39–15.99)

22 (3–62)

3 (1–14)

T-PSMB1 (n = 1)

0/1

0

8;0

0.39

3

1

T-DLL1 (n = 23)

3/20

2

17;0 (0;0–49;0)

1.95 (0.53–2.66)

10 (5–12)

2

T-AFDN (n = 16)

6/10

2

6;6 (0;6–57;0)

4.01 (3.07–4.97)

22 (14–24)

3

T-PDE10A (n = 10)

1/9

0

3;10 (0;1–25;0)

5.89 (5.16–7.00)

25

4

T-QKI (n = 7)

3/4

0

7;11 (0;8–25;0)

7.68 (7.37–7.84)

28 (27–28)

5

T-PRKN (n = 20)

15/5

0

5;0 (0;4–32;9)

8.57 (8.09–9.53)

29 (29–30)

6

T-MAP3K4 (n = 6)

4/2

2

6;3 (4;10–14;9)

10.14 (9.94–10.31)

33 (31–35)

7

T-R (n = 10)

3/7

2

8;0 (0;6–37;0)

12.12 (10.79–16.00)

51.5 (40–62)

11.5 (8–14)

Total Interstitial (n = 11)

3/8

0

6;0 (0;1–43;0)

0.33 (0.04–3.08)

2 (1–7)

1 (1–3)

  Parent cohort

3/0

0

6;0 (2;2–15;4)

0.33 (0.21–3.08)

1 (1–5)

1 (1–3)

  Literature cohort

0/8

0

10;2 (0;1–43;0)

0.61 (0.04–1.18)

4.5 (1–7)

1

I-6q26 (n = 6)

3/3

0

10;2 (0;1–19;0)

0.23 (0.04–3.08)

1.5 (1–5)

1 (1–3)

I-6q27 (n = 5)

0/5

0

6;0 (1;6–43;0)

0.97 (0.12–1.18)

7 (2–7)

1

  1. *If known, foetuses were excluded from the age calculations
  2. Genotype characteristics for all subgroups as represented in Fig. 1. The number (median and range) of all OMIM genes (https://www.omim.org) and the genes with predicted haploinsufficiency effect (HI-genes) (https://www.deciphergenomics.org) [36, 37], within the deletions are given