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Table 1. DEGs interactors of RFX6 in our analysis

From: Determining oncogenic patterns and cancer predisposition through the transcriptomic profile in Mitchell–Riley syndrome with heterotopic gastric mucosa and duodenal atresia: a case report

Gene symbol Gene name Control mean counts MRS mean counts Fold change q-value
AGAP4 ArfGAP with GTPase domain, ankyrin repeat and PH domain 4 97.37 4969.96 5.67 6.96e−24
ATR ATR serine/threonine kinase 1005.56 5420.26 2.43 4.94e−12
EHBP1 EH domain binding protein 1 316.07 2251.49 2.84 1.93e−20
EIF2AK3 Eukaryotic translation initiation factor 2 alpha kinase 3 761.30 4152.75 2.45 6.13e−14
GHRL Ghrelin and obestatin prepropeptide 308.44 16.68 − 4.21 1.58e−02
GLIS3 GLIS family zinc finger 3 13.28 200.13 3.88 2.23e−04
GPR68 G protein-coupled receptor 68 806.28 0 − 8.04 6.51e−04
IER3IP1 Immediate early response 3 interacting protein 1 303.11 0 − 6.63 5.38e−03
IFT88 Intraflagellar transport 88 192.00 1250.83 2.70 4.18e−11
MAFB MAF bZIP transcription factor B 1639.27 216.81 − 2.92 3.19e−03
PLAGL1 PLAG1 like zinc finger 1 963.13 166.78 − 2.53 1.11e−04
RFX7 Regulatory factor X7 794.65 3635.74 2.19 2.45e−07
RPGRIP1L RPGRIP1 like 55.03 300.20 2.42 2.47e−04
SYTL4 Synaptotagmin like 4 24.76 200.13 3.01 6.69e−03
  1. We highlighted the transcripts mean counts obtained after DESeq2 normalization, the fold changes computed as log2 (MRS mean counts/control mean counts) and the q-value for each of the DEGs in our analysis that interacts with RFX6 in STRING. All values are rounded to the second decimal digit