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Table 2 PCA/CA-embedded MCCV classification results for the different models

From: 1H-NMR-based metabolic profiling identifies non-invasive diagnostic and predictive urinary fingerprints in 5q spinal muscular atrophy

ID

SMA type

Correct classification

Comments

SMA vs. CTRL (%)

SMA 1 vs. SMA 2 vs. SMA 3 vs. CTRL

SMA 1/2 vs. SMA 3 vs. CTRL

SMA006

1

100

59% (*)

38% (*)

 

SMA007

1

100

100%

41% (*)

 

SMA008

1

4

95%

99%

 

SMA009

1

100

80% (*)

92% (*)

 

SMA010

1

100

100%

15% (*)

 

SMA011

1

100

11% (*)

85% (*)

Mild disease course, borderline SMA 2

SMA012

1

100

58% (41% SMA 2)

100%

 

SMA013

1

100

2% (98% SMA 2)

100%

Mild disease course, 3 SMN2 copies, no respiratory involvement, possible age bias

SMA014

1

100

90% (*)

99%

 

SMA015

2

0

0% (*)

0% (*)

Mild disease course, borderline SMA 3, good response to Nusinersen (standing and first steps) as potential sign for residual motor capacity

SMA016

2

100

0% (79% SMA 1)

53% (*)

 

SMA017

2

100

78%

97%

 

SMA018

2

100

0% (95% SMA 3)

16% (83% SMA 3)

Severe disease course, mild intellectual disability

Multiple comorbidities: pulmonary hypertension due to Ebstein anomaly, epileptic seizures

Medication: sildenafil, valproic acid

SMA019

2

100

28% (46% SMA 1)

96%

Severe disease course with orthopedic involvement: severe neuromyopathic scoliosis, spondylodesis

SMA020

2

34

0% (45% SMA 1)

100%

Orthopedic involvement: severe neuromyopathic scoliosis, spondylodesis

SMA021

2

100

15% (83% SMA 1)

100%

Respiratory involvement: s/p recurrent pneumonias, s/p pleural empyema requiring surgical intervention

Orthopedic involvement: severe neuromyopathic scoliosis, spondylodesis with recurrent bacterial infections requiring 11 surgical revisions resulting in extensive scarring of the back

SMA022

2

100

92%

100%

 

SMA023

3a

100

96%

63% (32% CTRL)

Mild disease course

SMA024

3a

100

0% (49% CTRL)

0% (83% SMA 1/2)

Mild disease course

SMA025

3a

100

27% (*)

59% (40% CTRL)

Mild disease course

SMA026

3a

100

16% (47% CTRL)

0% (85% CTRL)

Mild disease course

SMA027

3b

0

0% (*)

0% (*)

Mild disease course, ambulatory

SMA028

3b

0

24% (*)

37% (*)

Mild disease course, ambulatory

SMA029

3b

99

0% (80% CTRL)

0% (52% CTRL)

Mild disease course, ambulatory

  1. The healthy control group is not listed since all samples were classified correctly. (*) wrong assignment with CTRL 2 m-19 years only
  2. CTRL, Control; SMA, spinal muscular atrophy; s/p, status post