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Table 2 Nomenclature proposals for individual CMS disease entities and mapping to pre-existing classifications

From: A nomenclature and classification for the congenital myasthenic syndromes: preparing for FAIR data in the genomic era

Gene involved

Proposed descriptive name

OMIM phenotype number and name

Treatment options [4, 11]

Existing Orphanet name (group level)

Names in literature (group level)

Names in literature (entity level)

AGRN

Congenital myasthenic syndrome due to agrin deficiency caused by pathogenic variants in AGRN

615120: Myasthenic syndrome, congenital, 8; CMS8

Alternative/former titles:

Myasthenic syndrome, congenital, with pre- and postsynaptic defects; CMSPPD

Myasthenic syndrome, congenital, due to agrin deficiency

Salbutamol or ephedrine as first line; avoid pyridostigmine / acetylcholinesterase inhibitors

ORPHA:98913 Postsynaptic congenital myasthenic syndromes AND ORPHA:98914 Presynaptic congenital myasthenic syndromes

• Defects in endplate development and maintenance

• Agrin deficiency

ALG14

Congenital myasthenic syndrome due to a defect of glycosylation caused by pathogenic variants in ALG14

616227: Myasthenic syndrome, congenital, 15; CMS15

Alternative/former titles:

Myasthenic syndrome, congenital, without tubular aggregates; CMSWTA

Pyridostigmine as first line; may benefit from addition of 3,4-diaminopyridine

ORPHA:353327 Congenital myasthenic syndromes with glycosylation defect

• Limb-girdle-myasthenia with glycosylation deficiency

• CMS due to abnormal glycosylation

• Congenital defects of glycosylation

• Defects in protein glycosylation

• ALG14 myasthenia

ALG2

Congenital myasthenic syndrome due to a defect of glycosylation caused by pathogenic variants in ALG2

616228: Myasthenic syndrome, congenital, 14; CMS14

Alternative/former titles:

Myasthenic syndrome, congenital, with tubular aggregates 3; CMSTA3

Pyridostigmine as first line; may benefit from addition of 3,4-diaminopyridine

ORPHA:353327 Congenital myasthenic syndromes with glycosylation defect

• Limb-girdle-myasthenia with glycosylation deficiency

• CMS due to abnormal glycosylation

• Congenital defects of glycosylation

• Defects in protein glycosylation

• ALG2 myasthenia

CHAT

Congenital myasthenic syndrome due to endplate choline acetyltransferase deficiency caused by pathogenic variants in CHAT

254210: Myasthenic syndrome, congenital, 6, presynaptic; CMS6

Alternative/former titles:

Myasthenic syndrome, presynaptic, congenital, associated with episodic apnea; CMSEA

Congenital myasthenic syndrome type Ia2, CMS1a2, CMS Ia2,

Myasthenia, familial infantile, FIM,

Myasthenia gravis, familial infantile, 2, FIMG2,

Pyridostigmine as first line; may benefit from addition of 3,4-diaminopyridine or salbutamol / ephedrine

ORPHA:98914 Presynaptic congenital myasthenic syndromes

• CMS with episodic apnea

• Synthesis and Recycling of Acetylcholine

• Endplate choline acetyltransferase deficiency

• CMS with episodic apnea

CHRNA1

Slow-channel congenital myasthenic syndrome due to an acetylcholine receptor defect caused by a pathogenic variant in CHRNA1

601462: Myasthenic syndrome, congenital, 1a, slow-channel; CMS1a

Alternative/former titles:

Myasthenic syndrome, congenital, type IIA, CMS2a, CMS 2a

Fluoxetine or quinidine as first line; avoid pyridostigmine / acetylcholinesterase inhibitors

ORPHA:98913 Postsynaptic congenital myasthenic syndromes

• Slow-channel syndrome, SCS

• Kinetic abnormalities of the AChR

 

CHRNA1

Fast-channel congenital myasthenic syndrome due to an acetylcholine receptor defect caused by pathogenic variants in CHRNA1

608930: Myasthenic syndrome, congenital, 1b, fast-channel; CMS1b

Myasthenic syndrome, congenital, 1b, fast-channel; CMS1b

Pyridostigmine as first line; may benefit from addition of salbutamol / ephedrine or 3,4-diaminopyridine. Avoid β2-adrenergic agonists (fluoxetine / quinidine)

ORPHA:98913 Postsynaptic congenital myasthenic syndromes

• Fast-channel syndrome, FCS

• Kinetic abnormalities of the AChR

 

CHRNA1

Congenital myasthenic syndrome due to primary acetylcholine receptor deficiency caused by pathogenic variants in CHRNA1

N/A

Pyridostigmine as first line; may benefit from addition of 3,4-diaminopyridine or salbutamol / ephedrine

N/A

• Primary AChR deficiency

 

CHRNB1

Slow-channel congenital myasthenic syndrome due to an acetylcholine receptor defect caused by a pathogenic variant in CHRNB1

616313: Myasthenic syndrome, congenital, 2a, slow-channel; CMS2a

Fluoxetine or quinidine as first line; avoid pyridostigmine / acetylcholinesterase inhibitors

ORPHA:98913 Postsynaptic congenital myasthenic syndromes

• Slow-channel syndrome, SCS

• Kinetic abnormalities of the AChR

 

CHRNB1

Fast-channel congenital myasthenic syndrome due to an acetylcholine receptor defect caused by pathogenic variants in CHRNB1

N/A

Pyridostigmine as first line; may benefit from addition of salbutamol / ephedrine or 3,4-diaminopyridine. Avoid β2-adrenergic agonists (fluoxetine / quinidine)

N/A

• Fast-channel syndrome, FCS

• Kinetic abnormalities of the AChR

 

CHRNB1

Congenital myasthenic syndrome due to primary acetylcholine receptor deficiency caused by pathogenic variants in CHRNB1

616314: Myasthenic syndrome, congenital, 2c, associated with acetylcholine receptor deficiency; CMS2c

Pyridostigmine as first line; may benefit from addition of 3,4-diaminopyridine or salbutamol / ephedrine

ORPHA:98913 Postsynaptic congenital myasthenic syndromes

• Primary AChR deficiency

 

CHRND

Slow-channel congenital myasthenic syndrome due to an acetylcholine receptor defect caused by a pathogenic variant in CHRND

616321: Myasthenic syndrome, congenital, 3a, slow-channel; CMS3a

Fluoxetine or quinidine as first line; avoid pyridostigmine / acetylcholinesterase inhibitors

ORPHA:98913 Postsynaptic congenital myasthenic syndromes

• Slow-channel syndrome, SCS

• Kinetic abnormalities of the AChR

 

CHRND

Fast-channel congenital myasthenic syndrome due to an acetylcholine receptor defect caused by pathogenic variants in CHRND

616322: Myasthenic syndrome, congenital, 3b, fast-channel; CMS3b

Pyridostigmine as first line; may benefit from addition of salbutamol / ephedrine or 3,4-diaminopyridine. Avoid β2-adrenergic agonists (fluoxetine / quinidine)

ORPHA:98913 Postsynaptic congenital myasthenic syndromes

• Fast-channel syndrome, FCS

• Kinetic abnormalities of the AChR

 

CHRND

Congenital myasthenic syndrome due to primary acetylcholine receptor deficiency caused by pathogenic variants in CHRND

616323: Myasthenic syndrome, congenital, 3c, associated with acetylcholine receptor deficiency; CMS3c

Pyridostigmine as first line; may benefit from addition of 3,4-diaminopyridine or salbutamol / ephedrine

ORPHA:98913 Postsynaptic congenital myasthenic syndromes

• Primary AChR deficiency

 

CHRND

Congenital myasthenic syndrome due to defects in acetylcholine receptor clustering caused by pathogenic variants in CHRND

N/A

Pyridostigmine

N/A

  

CHRNE

Slow-channel congenital myasthenic syndrome due to an acetylcholine receptor defect caused by a pathogenic variant in CHRNE

605809: Myasthenic syndrome, congenital, 4a, slow-channel; CMS4a

Alternative/former titles:

Congenital myasthenic syndrome type Ia1, CMS1a1, CMS Ia1

Fluoxetine or quinidine as first line; avoid pyridostigmine / acetylcholinesterase inhibitors

ORPHA:98913 Postsynaptic congenital myasthenic syndromes

• Slow-channel syndrome, SCS

• Kinetic abnormalities of the AChR

 

CHRNE

Fast-channel congenital myasthenic syndrome due to an acetylcholine receptor defect caused by pathogenic variants in CHRNE

616324: Myasthenic syndrome, congenital, 4b, fast-channel; CMS4b

Pyridostigmine as first line; may benefit from addition of salbutamol / ephedrine or 3,4-diaminopyridine. Avoid β2-adrenergic agonists (fluoxetine / quinidine)

ORPHA:98913 Postsynaptic congenital myasthenic syndromes

• Fast-channel syndrome, FCS

• Kinetic abnormalities of the AChR

 

CHRNE

Congenital myasthenic syndrome due to primary acetylcholine receptor deficiency caused by pathogenic variants in CHRNE

608931: Myasthenic syndrome, congenital, 4c, associated with acetylcholine receptor deficiency; CMS4c

Alternative/former titles:

Myasthenic syndrome, congenital, type ID; CMS1D, CMS ID, Myasthenia, familial infantile, 1, FIM1,

Pyridostigmine as first line; may benefit from addition of 3,4-diaminopyridine or salbutamol / ephedrine

ORPHA:98913 Postsynaptic congenital myasthenic syndromes

• Primary AChR deficiency

 

CHRNE

Congenital myasthenic syndrome with kinetic defect due to reduced ion channel conductance caused by pathogenic variants in CHRNE

N/A

Pyridostigmine

N/A

• Kinetic abnormalities of the AChR

• Reduced ion channel conductance

 

COL13A1

Congenital myasthenic syndrome due to collagen 13 defects caused by pathogenic variants in COL13A1

616720: Myasthenic syndrome, congenital, 19; CMS19

Salbutamol / ephedrine as first line; may benefit from addition of 3,4-diaminopyridine. Pyridostigmine likely ineffective.

ORPHA:98913 Postsynaptic congenital myasthenic syndromes

• Synaptic and basal-lamina associated syndromes

• Synaptic space

 

COLQ

Congenital myasthenic syndrome due to endplate acetylcholinesterase deficiency caused by pathogenic variants in COLQ

603034: Myasthenic syndrome, congenital, 5; CMS5

Alternative/former titles:

Endplate acetylcholinesterase deficiency; EAD

Engel congenital myasthenic syndrome

Myasthenic syndrome, congenital, Engel type

Congenital myasthenic syndrome type IC, CMS1c, CMS IC

Salbutamol or ephedrine as first line; avoid pyridostigmine / acetylcholinesterase inhibitors

ORPHA:98915 Synaptic congenital myasthenic syndromes

• Synaptic and basal-lamina associated syndromes

• Synaptic space

• Endplate AChE deficiency

• Endplate acetylcholinesterase deficiency

DOK7

Congenital myasthenic syndrome due to defects in docking protein 7 caused by pathogenic variants in DOK7

254300: Myasthenic syndrome, congenital, 10; CMS10

Alternative/former titles:

Myasthenia, limb-girdle, familial, LGM,

Congenital myasthenic syndrome type Ib, CMS1b, CMS Ib, Myasthenic myopathy

Salbutamol or ephedrine as first line; avoid pyridostigmine / acetylcholinesterase inhibitors

ORPHA:98913 Postsynaptic congenital myasthenic syndromes

• Defects within the AChR-clustering pathway

• Defects in endplate development and maintenance

• DOK7-associated limb-girdle-myasthenia

• DOK7 CMS

• Dok-7 myasthenia

DPAGT1

Congenital myasthenic syndrome due to a defect of glycosylation caused by pathogenic variants in DPAGT1

614750: Myasthenic syndrome, congenital, 13; CMS13

Alternative/former titles:

Myasthenic syndrome, congenital, with tubular aggregates 2; CMSta2

Pyridostigmine as first line; may benefit from addition of 3,4-diaminopyridine or salbutamol / ephedrine

N/A

• Limb-girdle-myasthenia with glycosylation deficiency

• CMS due to abnormal glycosylation

• Congenital defects of glycosylation

• Defects in protein glycosylation

• DPAGT1 myasthenia

GFPT1

Congenital myasthenic syndrome due to a defect of glycosylation caused by pathogenic variants in GFPT1

610542: Myasthenic syndrome, congenital, 12; CMS12

Alternative/former titles:

Myasthenic syndrome, congenital, with tubular aggregates 1; CMSTA1

Pyridostigmine as first line; may benefit from addition of 3,4-diaminopyridine or salbutamol / ephedrine

N/A

• Limb-girdle-myasthenia with glycosylation deficiency

• CMS due to abnormal glycosylation

• Congenital defects of glycosylation

• Defects in protein glycosylation

• GFPT1 myasthenia

GMPPB

Congenital myasthenic syndrome due to a defect of glycosylation caused by pathogenic variants in GMPPB

N/A

(615352 is for the LGMD phenotype minus the myasthenic features)

Pyridostigmine as first line; may benefit from addition of 3,4-diaminopyridine or salbutamol / ephedrine

N/A

• Limb-girdle-myasthenia with glycosylation deficiency

• CMS due to abnormal glycosylation

• Congenital defects of glycosylation

• Defects in protein glycosylation

• GMPPB myasthenia

LAMB2

Congenital myasthenic syndrome due to laminin beta 2 deficiency caused by pathogenic variants in LAMB2

N/A

Salbutamol or ephedrine

ORPHA:98915 Synaptic congenital myasthenic syndromes

• Synaptic basal lamina-associated syndromes

• Laminin beta2 deficiency

LRP4

Congenital myasthenic syndrome due to defects in low-density lipoprotein receptor-related protein 4 caused by pathogenic variants in LRP4

616304: Myasthenic syndrome, congenital, 17; CMS17

Salbutamol or ephedrine as first line; avoid pyridostigmine / acetylcholinesterase inhibitors

ORPHA:98913 Postsynaptic congenital myasthenic syndromes

• Defects within the AChR-clustering pathway

• Defects in endplate development and maintenance

• LRP4 myasthenia

MUSK

Congenital myasthenic syndrome due to defects in MuSK caused by pathogenic variants in MUSK

616,325: Myasthenic syndrome, congenital, 9, associated with acetylcholine receptor deficiency; CMS9

Salbutamol or ephedrine as first line; avoid pyridostigmine / acetylcholinesterase inhibitors

ORPHA:98913 Postsynaptic congenital myasthenic syndromes

• Defects within the AChR-clustering pathway

• Defects in endplate development and maintenance

• Congenital MuSK myasthenia

• MuSK deficiency

MYO9A

Congenital myasthenic syndrome due to a defect in Myosin 9A caused by pathogenic variants in MYO9A

N/A

Pyridostigmine

ORPHA:98914 Presynaptic congenital myasthenic syndromes

• Axonal transport

• Presynaptic

• Myosin 9a deficiency

PLEC1

Congenital myasthenic syndrome due to plectin deficiency caused by pathogenic variants in PLEC1

N/A

Pyridostigmine

N/A

• Other myasthenic syndromes

• Plectin deficiency

PREPL

Congenital myasthenic syndrome caused by pathogenic variants in PREPL that predict reduced filling of synaptic vesicles with ACh

616224: Myasthenic syndrome, congenital, 22; CMS22

Alternative/former titles:

PREPL deficiency

Pyridostigmine

N/A

• Limb-girdle-myasthenia with glycosylation deficiency

• Synthesis and Recycling of Acetylcholine

• Other myasthenic syndromes

• PREPL deletion syndrome

• PREPL deficiency

RAPSN

Congenital myasthenic syndrome due to endplate rapsyn deficiency caused by pathogenic variants in RAPSN

616326: Myasthenic syndrome, congenital, 11, associated with acetylcholine receptor deficiency; CMS11

Alternative/former titles:

Myasthenic syndrome, congenital, Ie, CMS1e, CMS Ie

Pyridostigmine as first line; may benefit from addition of 3,4-diaminopyridine or salbutamol / ephedrine

ORPHA:98913 Postsynaptic congenital myasthenic syndromes

• Defects within the AChR-clustering pathway

• Defects in endplate development and maintenance

• Endplate rapsyn deficiency

• Rapsyn deficiency

• Rapsyn CMS

SCN4A

Congenital myasthenic syndrome due to a sodium channel 1.4 defect caused by pathogenic variants in SCN4A

614198: Myasthenic syndrome, congenital, 16; CMS16

Alternative/former titles:

Myasthenic syndrome, congenital, acetazolamide-responsive

Pyridostigmine as first line; acetazolamide may be helpful for periodic paralysis

ORPHA:98913 Postsynaptic congenital myasthenic syndromes

• Other myasthenic syndromes

• Na channel myasthenia

• Sodium channel myasthenia

SLC18A3

Congenital myasthenic syndrome due to a vesicular acetylcholine transporter defect caused by pathogenic variants in SLC18A3

617239: Myasthenic syndrome, congenital, 21, presynaptic; CMS21

Pyridostigmine

ORPHA:98914 Presynaptic congenital myasthenic syndromes

• Synthesis and recycling of acetylcholine

• Vesicular ACh transporter deficiency

SLC25A1

Congenital myasthenic syndrome due to a mitochondrial citrate carrier defect caused by pathogenic variants in SLC25A1

N/A

Pyridostigmine as first line; may benefit from addition of 3,4-diaminopyridine

ORPHA:98914 Presynaptic congenital myasthenic syndromes

• Other syndromes

• Mitochondrial citrate carrier deficiency

SLC5A7

Congenital myasthenic syndrome due to a choline transporter defect caused by pathogenic variants in SLC5A7

617143: Myasthenic syndrome, congenital, 20, presynaptic; CMS20

Pyridostigmine as first line; may benefit from addition of salbutamol / ephedrine

ORPHA:98914 Presynaptic congenital myasthenic syndromes

• Synthesis and recycling of acetylcholine

• High-affinity presynaptic choline transporter

SNAP25B

Congenital myasthenic syndrome due to a synaptosomal-associated protein 25 defect caused by pathogenic variants in SNAP25B

616330: Myasthenic syndrome, congenital, 18; CMS18

Alternative/former titles:

Myasthenic syndrome, congenital, 18, with intellectual disability and ataxia

3,4-diaminopyridine

N/A

• Synaptic vesicles exocytosis

• Presynaptic

• SNAP25-associated CMS

• SNAP25B CMS

• SNAP25B deficiency

SYT2

Congenital myasthenic syndrome due to a synaptotagmin defect caused by a pathogenic variant in SYT2

616040: Myasthenic syndrome, congenital, 7, presynaptic; CMS7

Alternative/former titles:

Myasthenic syndrome, presynaptic, congenital, with or without motor neuropathy; MYSPC

3,4-diaminopyridine

ORPHA:98914 Presynaptic congenital myasthenic syndromes

• Synaptic vesicles exocytosis

• Presynaptic

• SYT2 CMS

• Synaptotagmin 2 myasthenia

UNC13A

Congenital myasthenic syndrome due to a mammalian uncoordinated-13 protein defect caused by a pathogenic variant in UNC13A

N/A

3,4-diaminopyridine as first line; may benefit from addition of pyridostigmine

N/A

• Synaptic vesicles exocytosis

• Presynaptic

• Munc13–1 myasthenia

VAMP1

Congenital myasthenic syndrome due to a vesicle associated membrane protein 1 defect caused by a pathogenic variant in VAMP1

N/A

Pyridostigmine

N/A

• Synaptic vesicles exocytosis

• Presynaptic

• Synaptobrevin-1 myasthenia