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Table 1 qRT-PCR targets with corresponding Affymetrix probeset ID and primer used for amplification

From: A combination of transcriptome and methylation analyses reveals embryologically-relevant candidate genes in MRKH patients

Target

Affymetrix cluster ID

Forward primer

Reverse primer

HOXA5

8138735

CGCCCAACCCCAGATCTA

GGCCGCCTATGTTGTCATG

HOXA9

8138749

GCTTGTGGTTCTCCTCCAGT

CCAGGGTCTGGTGTTTTGTA

PGR

7951165

TGGTGTTTGGTCTAGGATGGA

GGATCTGCCACATGGTAAGG

ESR1

8122840

GCAGGGAGAGGAGTTTGTGT

CAGGACTCGGTGGATATGG

OXTR

8085138

GCACGGTCAAGATGACTTTC

GCATGTAGATCCAGGGGTTG

PEG10

8134339

GACCCCATCCTTCCTGTCTT

GCTTCACTTCTGTGGGGATG

MFAP5

7960919

TGCTCTCGTCTTGTCTGTAAGG

ACAGGGAGGAAGTCGGAAGT

IRS1

8059470

GTTTCCAGAAGCAGCCAGAG

GGAAGATATGAGGTCCTAGTTGTGA

IRS2

7972745

CTTCTTGTCCCACCACTTGA

CAGTGCTGAGCGTCTTCTTTT

IGF2

7937772

ACACCCTCCAGTTCGTCTGT

CGGAAACAGCACTCCTCAA

WISP2

8062864

GCGACCAACTCCACGTCT

GTCTCCCCTTCCCGATACA

CDH5

7996264

ACAACGAGGGCATCATCAA

AATGACCTGGGCTCTGTTTC

SDHA

8104166

AGAAGCCCTTTGAGGAGCA

CGATTACGGGTCTATATTCCAGA

PDHB

8088384

GAGGCTGGCCACAGTTTG

GAAATTGAACGCAGGACCTT

PGRMC1

8169617

GGTGTTCGATGTGACCAAAG

TGAGGTCAGAAAGGTCATCGT

HISPPD1

8169617

TCCATCATCTGACGTTCCAC

TGGTGTTGGGAGGATCTTTG