From: Association of MTHFR rs1801133 and homocysteine with Legg–Calvé–Perthes disease in Mexican patients
SNP and model | Genotype | Controls n (%) | Cases n (%) | OR (95% CI) | p value# | OR (95% CI)* | p value* |
---|---|---|---|---|---|---|---|
MTHFR rs1801133 | |||||||
T/T | 15 (32.6%) | 6 (26.1%) | 1.00 | 1.00 | |||
Codominant | C/T | 21 (45.6%) | 9 (39.1%) | 1.07 (0.31–3.66) | 0.43 (0.08–2.30) | ||
C/C | 10 (21.7%) | 8 (34.8%) | 2.00 (0.53–7.54) | 0.51 | 3.69 (0.56–24.56) | 0.07 | |
Dominant | T/T | 15 (32.6%) | 6 (26.1%) | 1.00 | 1.00 | ||
C/T-C/C | 31 (67.4%) | 17 (73.9%) | 1.37 (0.45–4.19) | 0.58 | 0.97 (0.23–3.99) | 0.96 | |
Recessive | T/T-C/T | 36 (78.3%) | 15 (65.2%) | 1.00 | 1.00 | ||
C/C | 10 (21.7%) | 8 (34.8%) | 1.92 (0.63–5.81) | 0.25 | 5.62 (1.02–30.93) | 0.038 | |
CBS rs115742905 | |||||||
T/T | 46 (100.0%) | 23 (100.0%) | Monomorphic SNP | Monomorphic SNP | |||
T/C | 0 (0.0%) | 0 (0.0%) | |||||
C/C | 0 (0.0%) | 0 (0.0%) | |||||
PT rs1799963 | |||||||
G/G | 46 (100.0%) | 23 (100.0%) | |||||
G/A | 0 (0.0%) | 0 (0.0%) | Monomorphic SNP | Monomorphic SNP | |||
A/A | 0 (0.0%) | 0 (0.0%) | |||||
COL1A1 rs1107946 | |||||||
G/G | 21 (45.6%) | 13 (56.5%) | 1.00 | 1.00 | |||
Codominant | G/T | 13 (28.3%) | 6 (26.1%) | 0.75 (0.23–2.45) | 0.63 | 0.73 (0.22–2.42) | |
T/T | 12 ((26.1%) | 4 (17.4%) | 0.54 (0.14–2.03) | 0.53 (0.14–2.00) | 0.62 | ||
Dominant | G/G | 21 (45.6%) | 13 (56.51%) | 1.00 | 1.00 | ||
G/T-T/T | 25 (54.4%) | 10 (43.5%) | 0.60 (0.17–2.11) | 0.41 | 0.63 (0.23–1.75) | 0.38 | |
Recessive | G/G-G/T | 34 (73.9%) | 19 (82.6%) | 1.00 | 1.00 | ||
T/T | 12 (26.1%) | 4 (17.4%) | 0.60 (0.17–2.11) | 0.41 | 0.59 (0.17–2.10) | 0.41 | |
COL1A1 rs2412298 | |||||||
C/C | 39 (84.8%) | 19 (82.6%) | 1.00 | 1.00 | |||
C/T | 7 (15.2%) | 4 (17.4%) | 1.17 (0.31–4.50) | 0.82 | 1.18 (0.31–4.55) | 0.81 | |
COL2A1 rs121912891 | |||||||
G/G | 46 (100.0%) | 23 (100.0%) | Monomorphic SNP | Monomorphic SNP | |||
G/A | 0 (0.0%) | 0 (0.0%) | |||||
A/A | 0 (0.0%) | 0 (0.0%) | |||||
COL2A1 rs387906558 | |||||||
G/G | 46 (100.0%) | 23 (100.0%) | Monomorphic SNP | Monomorphic SNP | |||
G/A | 0 (0.0%) | 0 (0.0%) | |||||
A/A | 0 (0.0%) | 0 (0.0%) |