Skip to main content

Table 2 Additional cases found by Neoseq

From: NeoSeq: a new method of genomic sequencing for newborn screening

Group

TMS

Neoseq

Follow-up

NBS result

Recall result

Disease

Gene

Exon

Nucleotide change

Variant

Mode

Type

False positive cases of TMS

FP001

C5 = 0.57

C5 = 0.85

Hear loss

GJB3

2

c.547G>A

Het

AD

P

 

FP002

C3 = 4.15

G6PD

G6PD

12

c.1388G>A

Hemi

AR

P

 

FP003

C3 = 7.86

C3/C2 = 0.34

C3 = 3.31

C3/C2 = 0.26

MMA

MMACHC

1,4

c.80A>G

c.567dup

Het

AR

P

P

 

Negative cases of TMS

NC001

normal

MELAS

MTTL1

/

m.3244A>G

Heteroplasmic

AR

P

 

NC002

normal

CH

DUOX2

13,14

c.1588A>T

c.1462G>A

Het

AR

P

P

 
  1. TMS-NGS (panel): NGS followed Tandem Mass Spectrometry, P: Pathogenic, LP: Likely pathogenic, US: Uncertain significance, AR: Autosomal recessive inheritance, AD: Autosomal dominant inheritance, Het: heterozygotes, Hom: homozygosis. Hemi: hemizygote