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Table 2 Literature reports based on the use of MOMIS and OPEN CLINICA tools for the Italian FSHD Registry

From: The Italian National Registry for FSHD: an enhanced data integration and an analytics framework towards Smart Health Care and Precision Medicine for a rare disease

Momis FSHD platform usage

Participants (n)

Study design

Conclusions

Subjects filtered by year: 2008–2013

Subjects filtered by allele: 1 - 3 RUs

Subjects filtered by term: proband and relatives

Subjects classified using CCEF annotations: category and FSHD score

66 probands

33 relatives

Subjects carrying 1–3 DRA were searched for disease early onset. Disease outcome was evaluated in de novo and familial probands and their relatives. To investigate the earliest signs of disease, the Infantile Anamnestic Questionnaire (IAQ) was used. Nikolic et al., 2016

The size of the D4Z4 allele is not always predictive of severe clinical outcome. The high degree of clinical variability suggests that additional factors contribute to the phenotype complexity

Subjects filtered by year: 2008–2009

Subjects filtered by allele: 1-9 RUs

Subjects filtered by geographic location: Modena, Turin, and Naples

Subjects classified using CCEF annotations: category and FSHD score

56 cases

Based on the 7-year experience of the ICNF, the inter-rater reproducibility of the CCEF was assessed between two examiners using kappa statistics in 56 subjects carrying the molecular marker used for FSHD diagnosis. Ricci et al., 2016

CCEF is an easy clinical tool useful to capture various phenotypes from classic FSHD to individuals with incomplete phenotype, or asymptomatic carriers as well as subjects with atypical signs for which alternative diagnoses may be supposed

Subjects filtered by year: 2008–2016

Subjects filtered by allele: 7-8 RUs

Subjects filtered by term proband and relatives

Subjects classified using CCEF annotations: category and FSHD score

187 probands

235 relatives

Probands and their relatives carrying 7–8 DRA were phenotypically stratified based on the CCEF categories. Ruggiero et al., 2020

Large phenotypic variability was found in individuals carrying a 7–8 DRA, in contrast to the indication that a positive molecular test is the only determining aspect for FSHD diagnosis. Carriers of a 7–8 DRA constitute a genetic subgroup different from classic FSHD. The use of CCEF and the family study are both required for clinical management and genetic counseling

Subjects filtered by year: 2008–2016

Subjects filtered by allele: 9-10 RUs Subjects filtered by term: proband and relatives

Subjects classified using CCEF annotations: category and FSHD score

134 probands

110 relatives

Probands and their relatives carrying 9 to 10 DRA were phenotypically stratified based on the CCEF categories. Ricci et al., 2020

Large phenotypic variability in 9–10 DRA carriers, including 70% of healthy relatives. Penetrance in families ranged between 20–100%. The use of CCEF and the family study are both required for clinical management and genetic counseling. Stratification of patients using the number of D4Z4 RUs is not accurate

Subjects filtered by term proband and relatives

Subjects classified using CCEF annotations: Category and FSHD score

Disease progression measured as ΔFSHD score

141 probands

105 relatives

Subjects were analyzed to estimate the disease worsening calculated as the FSHD score performed at baseline and at the end of 5-year follow-up (ΔFSHD score) Vercelli et al., 2020

The progression of disease is different between index cases and carrier relatives and the assessment of the CCEF categories has strong prognostic effect in FSHD1 patients

Subject filtered by clinical category: A1–A3, FSHD score > 1

Subjects filtered by term: proband and relatives

Subjects (relatives) classified using CCEF annotations: category and FSHD score

122 probands

110 relatives

The D4Z4 methylation level at 4q35 was assessed in 122 FSHD1 probands and in relatives carrying the same molecular defect presenting classical FSHD (category A), or incomplete /complex phenotype (categories B or D) or no muscle impairment (category C). Nikolic et al., 2020

The D4Z4 methylation levels among index cases and in families show a high variability with no association with clinical manifestation or disease progression

The results of D4Z4 methylation analysis must be cautiously interpreted in respect to disease prognosis, which requires family studies

Subjects filtered by term proband

Subjects filtered for non-familial cases

Subjects filtered by comorbidities/complex phenotypes

1339 FSHD unrelated cases

Among 1339 unrelated FSHD cases 3 unrelated cases presented signs of Williams-Beuren Syndrome (WBS) in early childhood and later developed FSHD. All 3 cases carry both molecular defects associated with the two disorders. Rodolico et al., 2020

The rarity of WBS and FSHD, 1 in 7500 and 1 in 20,000 respectively, argued for a nonrandom association of the two diseases. These cases open novel and unexpected interpretation of genetic findings providing hints for the identification of genes and functional pathways involved