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Table 3 Genetic analysis of four patients with neonatal-onset watery diarrhea

From: Monogenic mutations in four cases of neonatal-onset watery diarrhea and a mutation review in East Asia

 

Patient 1

Patient 2

Patient 3

Patient 4

MIM

185,535

185,535

214,700

251,850

Gene

EPCAM

EPCAM

SLC26A3

MYO5B

Position (Hg19)

Chr2:

Chr2:

Chr7:

Chr18:

47,600,715

47,600,621

107,415,299

47,500,736

47,596,623–47,613,791

47,607,073

107,434,187

47,405,401

Transcripts

NM_002354.2

NM_002354.2

NM_000111.2

NM_001080467.2

Variants (cDNA)

 Variants1

c.184 + 6T > G

c.96 C > A

c.1696 C > T

c.1306 G > T

 Variants2

Exon 1–9 large deletion

c.823delG

c.269_270dupAA

c.3190 C > T

Variants (protein)

 Variants1

Splice-site change

p.Y32*

p.R566*

p.V436F

 Variants2

Exon 1–9 large deletion

p.V275Wfs*2

p.G91Kfs*3

p.R1064*

Consequence

 Variants1

Splicing mutation

Nonsense

Nonsense

Missense

 Variants2

17.168 kb deletion

Frameshift

Frameshift

Nonsense

Exon/intron

 Variants1

Intron 2

Exon 2

Exon 16

Exon 10

 Variants2

Exon 1–9 large deletion

Exon 7

Exon 3

Exon 24

Parental origin

 Variants1

Maternal

Maternal

Paternal

Paternal

 Variants2

Paternal

Paternal

Maternal

Maternal

Pathogenicity

 Variants1

Pathogenic

Likely pathogenic

Pathogenic

Likely pathogenic

 Variants2

Pathogenic

Likely pathogenic

Pathogenic

Likely pathogenic