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Table 2 Genes with mutations resulting in premature termination codons and nonsense mediated decay.

From: The diagnosis of inherited metabolic diseases by microarray gene expression profiling

Gene

MIM entry

Chip number

Mutation

Predicted effect

ACADM*

607008

33

c.321-324delATTA

c.199T > C, [Y67H]

Premature termination

ADA

608958

46

c.350G > A, [W117X], second mutation unknown

Premature termination

ADSL

608222

67

c.7G > C, [A3P]

c.578C > T, [R190X]

AA substitution

Premature termination

AGA

613228

89

c.788delT

Premature termination

DGUOK

601465

8

c.398C > T, [R105X]

Premature termination

GAA*

606800

49

c.2560C > T, [R854X]

Premature termination

HEXA

606869

2

c.1278-1282insTATC, second mutation unknown

Premature termination

HEXA

606869

84

c.1278-1282insTATC, second mutation unknown

Premature termination

HPRT1

300322

73

g.IVS6+2T > A

3'splice junction (exon insertion)

HPRT1

300322

75

g.IVS7+1G > T

Exon 7 skipping

MOCS2*

603708

93

c.564G > C, [W228C]

c.726-727delAA

exon 5 skipping

Premature termination

NPC1

607623

85

c.1189C > T, [Q397X]

Premature termination

NPC2

601015

6

c.58G > T, [E20X]

Premature termination

SURF1

185620

9

c.326-327insAT 326-336 del TCTGCCAGCC

c.823-842delATCGTGACCTGGTGAAGTC

Premature termination

  1. * Genes excluded from analysis through probe set selection and classified as false negatives