From: α-thalassaemia
Affected sequence | Affected gene * | Mutation(s) | HGVS | Synonym Hb- name | Distribution | Phenotype |
---|---|---|---|---|---|---|
mRNA processing | ||||||
Cryptic splicing | α2 | Cd22 C>T | c.69C>T p.Gly23Gly | Surinamese | α+ | |
IVS(donor) | α2 | IVS I(-5 nt) | c.95+2_95+6delTGAGG | Mediterranean | α+ | |
α1 | IVS I-1(g>a) | c.95+1G>A | Thai | α+ | ||
α2 | IVS II-2 (t>a) | c.300+2T>A | North-European | α+ - α0 | ||
IVS(acceptor) | α2 | IVS I-116 (a>g) | c.96-2A>G | Dutch | α+ | |
α1 | IVS I-117 (g>a) | c.96-1G>A | Asian Indian | α+ | ||
α2 | IVS II-142 (g>a) | c.301-1G>A | Argentinian | α+ - α0 | ||
α1 | IVS II-148 (a>g) | c.301-2A>G | Iranian | α+ | ||
Poly A signal | α2 | PA del 16 bp | c.*74_*89delCCTTCCTGGTCTTTGA | Arab | α+ - α0 | |
α2 | PA1 (AATAAG) | c.*94A>G | Middle East, Med | α+ - α0 | ||
α2 | PA2 (AATGAA) | c.*92A>G | Med, Chinese | α+ - α0 | ||
α2 | PA3 (AATA- -) | c.*93_*94delAA | Asian Indian | α+ - α0 | ||
α2 | PA4 (AATAAC) | c.*94A>C | α+ - α0 | |||
mRNA translation | ||||||
Initiation codon | - α3.7 | init ATG>GTG | c.1A>G p.Met1Val | African | α0 | |
- α3.7 II | init (-2 bp) | c.-2_-3delAC | N-African, Med | α+ - α0 | ||
α2 | init ATG>ACG | c.2T>C p.Met1Thr | Med | α+ | ||
α2 | init ATG>A-G | c.2delT p.Met1fs | Vietnam | α+ | ||
α1 | init ATG>GTG | c.1A>G p.Met1Val | Med | α+ | ||
α2 | init ATG>-TG | c.1delA p.Met1fs | South-East Asian | α+ | ||
Exon I | α1 | Cd14 G>A | c.44G>A p.Trp15X | Iranian | α0 | |
α2 | Cd19 (-G) | c.60delG p.His21fs | Iranian | α+ | ||
α2 | Cd22 (-C) | c.69delC p.Gly23fs | African | |||
α2 | Cd23 (G>T) | c.70G>T p.Glu24X | Tunesian | α0 | ||
- α | Cd30/31(-2 bp) | c.94_95delAG | African | α0 | ||
Exon II | α2 | Cd39/41(del/ins) | c.118_126delACCAAGACC dup TACTTCCC p.Thr40fs | Yemenite-Jewish | α+ | |
α1 | Cd51-55(-13 bp) | c.155_167delGCTCTGCCCAGGT p.Gly52fs | Spanish | α+ | ||
α1 | Cd62(-G) | c.187delG p.Val63fs | African | |||
α1 | Cd78(-C) | c.237delC p.Asn79fs | Black/Chinese | |||
α2 | Cd90 A>T | c.271A>T p.Lys91X | Middle Eastern | α+ | ||
Exon III | α1 | Cd108(-C) | c.326delC p.Thr109fs | Jewish | α+ - α0 | |
α2 | Cd113/114(-C) | c.342_343delC p.Leu114fs | Unknown | |||
α2 | Cd113-116(-12 bp) | c.[339C>G;340_351delCTCCCCGCCGAG] | Leida | Spanish | α+ - α0 | |
α2 | Cd116 G>T | c.349G>T p.Glu117X | African | α+ | ||
α1 | Cd131(+T) | c.396_397insT | Pak Num Po | Thai | α0 | |
Termination codon | α2 | Term Cd TAA>CAA | c.427T>C p.X143Gln | Constant Spring | South-East Asian | α+ |
α2 | Term Cd TAA>AAA | c.427T>A p.X143Lys | Icaria | Med | α+ | |
α2 | Term Cd TAA>TCA | c.428A>C p.X143Ser | Koya Dora | Indian | α+ | |
α2 | Term Cd TAA>GAA | c.427T>G p.X143Glu | Seal Rock | African | α+ | |
α2 | Term Cd TAA>TAT | c.429A>T p.X143Leu | Paksé | Laotian, Thai | α+ | |
Post translational | ||||||
Exon I | - α | Cd14 T>G | c.43T>G p.Trp15Gly | Evanston | African | α+ |
α2 | Cd21 G>T | c.64G>T p.Ala22Ser | Zoetermeer | Dutch | α+ | |
α2 | Cd21 G>C | c.64G>C p.Ala22Pro | Fontaine-bleau | French | α+ | |
α2 | Cd29 T>C | c.89T>C p.Leu30Pro | Agrinio | Med | α+ | |
α2 | Cd30(-3 bp) | c.91_93delGAG p.Glu31del | Chinese | α+ - α0 | ||
α2 | Cd31 G>A | c.95G>A | Chinese | α+ - α0 | ||
Exon II | α2 | Cd32 G>A | c.99G>A p.Met33Ile | Amsterdam | Surinamese black | α+ - α0 |
α2 | Cd33 T>C | c.101T>C p.Phe34Ser | Chartres | French | α+ | |
α2 | Cd35 T>C | c.106T>C p.Ser36Pro | Evora | Filipino, Portugese | α+ - α0 | |
α1 | Cd37(-3 bp) | c.112_114delCCC | Heraklion | Greece | α+ - α0 | |
α2 | Cd59 G>A | c.179G>A p.Gly60Asp | Adana | Chinese | α+ - α0 | |
α1 | Cd60/61(-3 bp) | c.184_186delAAG | Clinic | Spanish | α+ - α0 | |
α2 | Cd62(-3 bp) | c.187_189delGTG | Aghia Sophia | Greek | α0 | |
α1 | Cd64-74(-33 bp) | c.196_228delGCGCTGACCAAGGCCGTGGCGCACGTGGAC | Greek | α0 | ||
α2 | Cd66 T>C | c.200T>C p.Leu67Pro | Dartmouth | Caucasian | α+ - α0 | |
α2 | Cd93 T>G | c.281T>G p.Val94Gly | Bronte | Italian | α+ | |
α1 | Cd93-99(dup21 bp) | c.280_300dupGTGGACCCGGTCAACTTCAAG | Iranian | α+ - α0 | ||
Exon III | α2 | Cd103 A>T | c.311A>T p.His104Leu | Bronovo | Turkish | α+ |
α2 | Cd104 G>A | c.314G>A Cys105Tyr | Sallanches | French/Pakistani | α+ | |
α1 | Cd104 T>A | c.313T>A p.Cys105Ser | Oegstgeest | Surinamese | α+ | |
α2 | Cd108 C>A | c.326C>A p.Thr109Asn | Bleuland | Surinamese | α+ | |
α2 | Cd109 T>G | c.329T>G p.Leu110Arg | Suan Dok | Thai | α+ | |
α | Cd110 C>A | c.332C>A Ala111Asp | Petah Tikva | Middle East | α+ | |
α1 | Cd119 C>T | c.358C>T p.Pro120Ser | Groene Hart or Bernalda | Moroccan | α+ | |
α2 | Cd125 T>G | c.377T>G p.Leu126Arg | Plasencia | Spanish | α+ | |
α2 | Cd125 T>C | c.377T>C p.Leu126Pro | Quong Sze | Chinese | α+ | |
- α3.7 | Cd125 T>A | c.377T>A p.Leu126Gln | Westeinde | Jewish | α0 | |
α1 | Cd129 T>C | c.389T>C p.Leu130Pro | Tunis-Bizerte | Tunisian | α+ | |
α2 | Cd129 T>C | c.389T>C p.Leu130Pro | Utrecht | Dutch | α+ | |
α2 | Cd130 G>C | c.391G>C p.Ala131Pro | Sun Prairie | Asian Indian | α+ | |
α2 | Cd131 T>C | c.394T>C p.Ser132Pro | Questembert | French/Yugoslavian | α+ | |
α2 | Cd132 T>G | c.398T>G p.Val133Gly | Caen | Caucasian | α+ | |
α2 | Cd136 T>C | c.410T>C p.Leu137Pro | Bibba | Caucasian | α+ |