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Table 1 Homozygous SNVs without SNP annotation identified by next-generation sequencing of mapped HBD regions

From: Targeted next-generation sequencing identifies a homozygous nonsense mutation in ABHD12, the gene underlying PHARC, in a family clinically diagnosed with Usher syndrome type 3

Gene

Refseq

cds (ref./var.)

Ratio reference/variant

AA change

rs number

ABHD12

NM_001042472.2 NM_015600.4

c.193C > T

0/85

p.Arg65X

NA

ID1

NM_002165

c.34 G > A

1/54

p.Ala12Thr

NA

RGS7

NM_002924

c.200 T > C

1/21

p.Ile67Thr

NA

  1. NA, not annotated.